ddgRADer

Sequencing efficiency of paired-end sequencing

Goal of this tool

Usage modes

“I have no idea!“: Get suggestions for enzyme choices out of commonly used restriction enzymes

“Lemme try out!”: You choose restriction enzymes to explore

Analysis Types

Demographic analysis

Genome Scan

Estimating SNP density

Examples of genome/population samples with different SNP densities

Enzyme choice

4- 6- 8- base cutters

GC content of restriction site of genome

Read overlaps and adaptor contamination

Table metrics

Graph

Table

How to cite

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